I'm comparing strings to compute similarity between them. Initially I went for "Levenshtein Distance" algorithm, but it now turns out that it is not the best algorithm for the kind of input I have. My input strings can undergo block-move operations, which results in large Levenshtein distance between very similar string. Here is an example of two string that have large edit distance, but are essentially similar:
First version
Q: Pick your favorite breed:
German Shephard
Dalmation
Colly
Rottweiler
Great Dane
Second version
Q: Which of the following breed is your favorite:
Colly
Dalmation
German Shephard
Great Dane
Rottweiler
I then checked for the diff utility that is used by GIT, which IIRC uses Myers algorithm, but GIT too suffers from the problem that it can't detect block shifts and considers them as two delete and insert operations.
Which other algorithm do I have that would give me smaller distances for strings that are qualitatively similar but might have large edit distances? Even better if an implementation in C#, VB.NET, C++ or Java is available so that I could port it.
Note: Qualitative does not mean any kind of intelligent content analysis. It would still be objective, but should just consider block moves to be one operation rather than N operations, where N is the number characters in the block.
Related
I'm looking for an algorithm than can compare two text messages (let's say forum posts) and identify the similarity in percentage.
What would be the most efficient solution for this purpose?
The idea is to use this algorithm to identify users on a forum who have more than two nicknames, pretending to be different people.
I'm going to build a program that will read all their posts and compare each post from the first account to posts of the second account to find whether they are genuinely two different persons or just two registrations of a single user.
The first thing that came to my mind was the Levenshtein Distance, but it is more focused on words similarities.
You could use tf-idf, but it will probably work better if your corpus contains more than only two documents.
An alternative could be representing the documents (posts) using a vector space model, like:
(w_0, w_1, ..., w_k)
where
k is the total of terms (words) in your document
w_i is the i-th term.
and then compute the Hamming Distance, which basically compares two vectors (arrays) and count the positions where they are different. You can discard stop-words first (i.e. words like prepositions, etc.)
Take in count that the user might change some words, use synonyms, etc. There are lots of models for representing documents, computing similarity between them. Some of them take in count words dependency, which gives more semantic to the process, and others don't.
google-diff-match-patch will be a good choice for you. you can look the demo for testing.
In my project i face a scenario where i have a function with numerous inputs. At a certain point i am provided with an result and i need to find one combination of inputs that generates that result.
Here is some pseudocode that illustrates the problem:
Double y = f(x_0,..., x_n)
I am provided with y and i need to find any combination that fits the input.
I tried several things on paper that could generate something, but my each parameter has a range of 6.5 x 10^9 possible values - so i would like to get an optimal execution time.
Can someone name an algorithm or a topic that will be useful for me so i can read up on how other people solved simmilar problems.
I was thinking along the lines of creating a vector from the inputs and judjing how good that vektor fits the problem. This sounds awful lot like an NN, but there is no training phase available.
Edit:
Thank you all for the feedback. The comments sum up the Problems i have and i will try something along the lines of hill climbing.
The general case for your problem might be impossible to solve, but for some cases there are numerical methods that can help you solve your problem.
For example, in 1D space, if you can find a number that is smaller then y and one that is higher then y - you can use the numerical method regula-falsi in order to numerically find the "root" (which is y in your case, by simply invoking the method onf(x) -y).
Other numerical method to find roots is newton-raphson
I admit, I am not familiar with how to apply these methods on multi dimensional space - but it could be a starter. I'd search the literature for these if I were you.
Note: using such a method almost always requires some knowledge on the function.
Another possible solution is to take g(X) = |f(X) - y)|, and use some heuristical algorithms in order to find a minimal value of g. The problem with heuristical methods is they will get you "close enough" - but seldom will get you exactly to the target (unless the function is convex)
Some optimizations algorithms are: Genethic Algorithm, Hill Climbing, Gradient Descent (where you can numerically find the gradient)
Okay so I'm trying to make a basic malware scanner in C# my question is say I have the Hex signature for a particular bit of code
For example
{
System.IO.File.Delete(#"C:\Users\Public\DeleteTest\test.txt");
}
//Which will have a hex of 53797374656d2e494f2e46696c652e44656c657465284022433a5c55736572735c5075626c69635c44656c657465546573745c746573742e74787422293b
Gets Changed to -
{
System.IO.File.Delete(#"C:\Users\Public\DeleteTest\notatest.txt");
}
//Which will have a hex of 53797374656d2e494f2e46696c652e44656c657465284022433a5c55736572735c5075626c69635c44656c657465546573745c6e6f7461746573742e74787422293b
Keep in mind these bits will be within the entire Hex of the program - How could I go about taking my base signature and looking for partial matches that say have a 90% match therefore gets flagged.
I would do a wildcard but that wouldn't work for slightly more complex things where it might be coded slightly different but the majority would be the same. So is there a way I can do a percent match for a substring? I was looking into the Levenshtein Distance but I don't see how I'd apply it into this given scenario.
Thanks in advance for any input
Using an edit distance would be fine. You can take two strings and calculate the edit distance, which will be an integer value denoting how many operations are needed to take one string to the other. You set your own threshold based off that number.
For example, you may statically set that if the distance is less than five edits, the change is relevant.
You could also take the length of string you are comparing and take a percentage of that. Your example is 36 characters long, so (int)(input.Length * 0.88m) would be a valid threashold.
First, your program bits should match EXACTLY or else it has been modified or is corrupt. Generally, you will store an MD5 hash on the original binary and check the MD5 against new versions to see if they are 'the same enough' (MD5 can't guarantee a 100% match).
Beyond this, in order to detect malware in a random binary, you must know what sort of patterns to look for. For example, if I know a piece of malware injects code with some binary XYZ, I will look for XYZ in the bits of the executable. Patterns get much more complex than that, of course, as the malware bits can be spread out in chuncks. What is more interesting is that some viruses are self-morphing. This means that each time it runs, it modifies itself, meaning the scanner does not know an exact pattern to find. In these cases, the scanner must know the types of derivatives can be produced and look for all of them.
In terms of finding a % match, this operation is very time consuming unless you have constraints. By comparing 2 strings, you cannot tell which pieces were removed, added, or replaced. For instance, if I have a starting string 'ABCD', is 'AABCDD' a 100% match or less since content has been added? What about 'ABCDABCD'; here it matches twice. How about 'AXBXCXD'? What about 'CDAB'?
There are many DIFF tools in existence that can tell you what pieces of a file have been changed (which can lead to a %). Unfortunately, none of them are perfect because of the issues that I described above. You will find that you have false negatives, false positives, etc. This may be 'good enough' for you.
Before you can identify a specific algorithm that will work for you, you will have to decide what the restrictions of your search will be. Otherwise, your scan will be NP-hard, which leads to unreasonable running times (your scanner may run all day just to check one file).
I suggest you look into Levenshtein distance and Damerau-Levenshtein distance.
The former tells you how many add/delete operations are needed to turn one string into another; and the latter tells you how many add/delete/replace operations are needed to turn one string into another.
I use these quite a lot when writing programs where users can search for things, but they may not know the exact spelling.
There are code examples on both articles.
A SO post about generating all the permutations got me thinking about a few alternative approaches. I was thinking about using space/run-time trade offs and was wondering if people could critique this approach and possible hiccups while trying to implement it in C#.
The steps goes as follows:
Given a data-structure of homogeneous elements, count the number of elements in the structure.
Assuming the permutation consists of all the elements of the structure, calculate the factorial of the value from Step 1.
Instantiate a newer structure(Dictionary) of type <key(Somehashofcollection),Collection<data-structure of homogeneous elements>> and initialize a counter.
Hash(???) the seed structure from step 1, and insert the key/value pair of hash and collection into the Dictionary. Increment the counter by 1.
Randomly shuffle(???) the order of the seed structure, hash it and then try to insert it into the Dictionary from step 3.
If there is a conflict in hashes,repeat step 5 again to get a new order and hash and check for conflict. Upon successful insertion increment the counter by 1.
Repeat steps 5 & 6 until the counter equals the factorial calculated in step 2.
It seems like doing it this way using some sort of randomizer(which is a black box to me at the moment) might help with getting all the permutations within a decent timeframe for datasets of obscene sizes.
It will be great to get some feedback from the great minds of SO to further analyze this approach whose objective is to deviate from the traditional brute-force approach prevalent in algorithms of such nature and also the repercussions of implementing such an algorithm using C#.
Thanks
This method of generating all permutations does not fare well as compared to the standard known methods.
Say you had n items and M=n! permutations.
This method of generation is expected to generate M*lnM permutations before discovering all M.
(See this answer for a possible explanation: Programing Pearls - Random Select algorithm)
Also, what would the hash function be? For a reasonable hash function, we might have to start dealing with very large integer issues pretty soon (any n > 50 for sure, don't remember that exact cut-off point).
This method uses up a lot of memory too (the hashtable of all permutations).
Even assuming the hash is perfect, this method would take expected Omega(nMlogM) operations and guaranteed Omega(nM) space, while standard well-known methods can do it in O(M) time and O(n) space.
As a starting point I suggest one can read: Systematic Generation of All Permutations which is believe is O(nM) time and O(n) space and still much better than this method.
Note that if one has to generate all permutations, any algorithm will necessarily take Omega(M) steps and so the the method I refer to above is optimal!
It seems like a complicated way to randomise the order of the generated permutations. In terms of time efficiency, you can't do much better than the 'brute force' approach.
I'm currently working on a project that requires me to match our database of Bands and venues with a number of external services.
Basically I'm looking for some direction on the best method for determining if two names are the same. For Example:
Our database venue name - "The Pig and Whistle"
service 1 - "Pig and Whistle"
service 2 - "The Pig & Whistle"
etc etc
I think the main differences are going to be things like missing "the" or using "&" instead of "and" but there could also be things like slightly different spelling and words in different orders.
What algorithms/techniques are commonly used in this situation, do I need to filter noise words or do some sort of spell check type match?
Have you seen any examples of something simlar in c#?
UPDATE: In case anyone is interested in a c# example there is a heap you can access by doing a google code search for Levenshtein distance
The canonical (and probably the easiest) way to do this is to measure the Levenshtein distance between the two strings. If the distance is small relative to the size of the string, it's probably the same string. Note that if you have to compare a lot of very small strings it'll be harder to tell whether they're the same or not. It works better with longer strings.
A smarter approach might be to compare the Levenshtein distance between the two strings but to assign a distance of zero to the more obvious transformations, like "and"/"&", "Snoop Doggy Dogg"/"Snoop", etc.
I did something like this a while ago, I used the the Discogs database (which is public domain), which also tracks artist aliases;
You can either:
Use an API call (namevariations field).
Download the monthly data dumps (*_artists.xml.gz) & import it in your database. This contains the same data, but is obviously a lot faster.
One advantage of this over the Levenshtein distance) solution is that you'll get a lot less false matches.
For example, Ryan Adams and Bryan Adams have a score of 2, which is quite good (lower is better matches, Pig and Whistle and Pig & Whistle has a score of 3), yet they're obviously different people.
While you could make a smarter algorithm (which also looks at string length, for example), using the alias DB is a lot simpler & less error-phone; after implementing this, I could completely remove the solution that was suggested in the other answer & had better matches.
soundex may also be useful
In bioinformatics we use this to compare DNA- or protein sequences all the time.
There are plenty of algorithms, you probably want to look at global alignments.
In this respect the Needleman-Wunsch algorithm is probably what you seek.
If you have particularly long recurring strings to compare you might also want to consider heuristic searches like BLAST.